U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

dis3l DIS3 like exosome 3'-5' exoribonuclease [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108926723, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
dis3l
Gene description
DIS3 like exosome 3'-5' exoribonuclease
See related
Ensembl:ENSSFOG00015024038
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 11
Exon count:
18
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 11 NC_041816.1 (9076010..9086933, complement)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371576.1 (72075..82680, complement)

Chromosome 11 - NC_041816.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase 1 Neighboring gene timeless interacting protein Neighboring gene multiple EGF-like-domains 11 Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene RAB11a, member RAS oncogene family

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DIS3-like exonuclease 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041816.1 Reference fSclFor1.1 Primary Assembly

    Range
    9076010..9086933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018739607.2 → XP_018595123.2  DIS3-like exonuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A0P7VC53, A0A8C9V972
    Related
    ENSSFOP00015037758.2, ENSSFOT00015038176.2
    Conserved Domains (3) summary
    COG0557
    Location:201 → 897
    VacB; Exoribonuclease R [Transcription]
    pfam17215
    Location:873 → 949
    Rrp44_S1; S1 domain
    cd09862
    Location:11 → 185
    PIN_Rrp44-like; VapC-like PIN domain of yeast exosome subunit Rrp44 endoribonuclease and other eukaryotic homologs

  2. XM_018739608.2 → XP_018595124.2  DIS3-like exonuclease 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C9STQ6
    Conserved Domains (3) summary
    COG0557
    Location:116 → 812
    VacB; Exoribonuclease R [Transcription]
    pfam17215
    Location:788 → 864
    Rrp44_S1; S1 domain
    cl28905
    Location:10 → 100
    PIN_SF; PIN (PilT N terminus) domain: Superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.