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katnb1 katanin p80 (WD repeat containing) subunit B 1 [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108926213, updated on 14-Mar-2024

Summary

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Gene symbol
katnb1
Gene description
katanin p80 (WD repeat containing) subunit B 1
See related
Ensembl:ENSSFOG00015018207
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 7
Exon count:
20
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 7 NC_041812.1 (20374582..20386274)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371571.1 (407283..418895)

Chromosome 7 - NC_041812.1Genomic Context describing neighboring genes Neighboring gene cyclic nucleotide gated channel subunit beta 1a Neighboring gene matrix metallopeptidase 15a Neighboring gene adhesion G-protein coupled receptor G5-like Neighboring gene Y+L amino acid transporter 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule severing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of katanin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
katanin p80 WD40 repeat-containing subunit B1
Names
katanin regulatory subunit B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041812.1 Reference fSclFor1.1 Primary Assembly

    Range
    20374582..20386274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018738803.2 → XP_018594319.1  katanin p80 WD40 repeat-containing subunit B1

    UniProtKB/TrEMBL
    A0A8C9T2V7, A0A8C9TR87
    Related
    ENSSFOP00015054817.1, ENSSFOT00015081355.1

  2. XM_018738802.2 → XP_018594318.1  katanin p80 WD40 repeat-containing subunit B1

    UniProtKB/TrEMBL
    A0A8C9T2V7, A0A8C9TR87
    Related
    ENSSFOP00015041325.1, ENSSFOT00015074571.1
Nucleotide Protein
Heading Accession and Version

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