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hexb hexosaminidase B (beta polypeptide) [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108925107, updated on 14-Mar-2024

Summary

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Gene symbol
hexb
Gene description
hexosaminidase B (beta polypeptide)
See related
Ensembl:ENSSFOG00015015989
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 6 NC_041811.1 (17878718..17889376)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371558.1 (1645332..1655947)

Chromosome 6 - NC_041811.1Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor (GEF) 28a Neighboring gene ectodermal-neural cortex 1 Neighboring gene GTP dependent ribosome recycling factor mitochondrial 2 Neighboring gene NSA2 ribosome biogenesis homolog (S. cerevisiae)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylhexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ganglioside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-hexosaminidase subunit beta
Names
hexosaminidase subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041811.1 Reference fSclFor1.1 Primary Assembly

    Range
    17878718..17889376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029253018.1 → XP_029108851.1  beta-hexosaminidase subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A8C9S0V2
    Related
    ENSSFOP00015038379.1, ENSSFOT00015083010.1
    Conserved Domains (2) summary
    cd06562
    Location:190 → 533
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
    pfam14845
    Location:45 → 168
    Glycohydro_20b2; beta-acetyl hexosaminidase like

  2. XM_018736864.2 → XP_018592380.1  beta-hexosaminidase subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A8C9S0V2, A0A8C9S5M3
    Related
    ENSSFOP00015024898.1, ENSSFOT00015025172.2
Nucleotide Protein
Heading Accession and Version

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