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snx9b sorting nexin 9b [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108924085, updated on 14-Mar-2024

Summary

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Gene symbol
snx9b
Gene description
sorting nexin 9b
See related
Ensembl:ENSSFOG00015020430
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Also known as
snx9
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 1 NC_041806.1 (34060470..34084557)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371550.1 (700708..724532, complement)

Chromosome 1 - NC_041806.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase polypeptide 1 Neighboring gene monooxygenase, DBH-like 1, like Neighboring gene angiopoietin-related protein 7-like Neighboring gene pro-opiomelanocortin-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cleavage furrow formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane tubulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-9
Names
sorting nexin 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041806.1 Reference fSclFor1.1 Primary Assembly

    Range
    34060470..34084557
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018735227.2 → XP_018590743.1  sorting nexin-9 isoform X1

    UniProtKB/TrEMBL
    A0A8C9SCR6, A0A8C9SEZ9
    Related
    ENSSFOP00015031883.1, ENSSFOT00015032240.2

  2. XM_018735228.2 → XP_018590744.1  sorting nexin-9 isoform X2

    UniProtKB/TrEMBL
    A0A8C9SCR6
    Related
    ENSSFOP00015031899.2, ENSSFOT00015032254.2
Nucleotide Protein
Heading Accession and Version

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