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ahi1 Abelson helper integration site 1 [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108921944, updated on 14-Mar-2024

Summary

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Gene symbol
ahi1
Gene description
Abelson helper integration site 1
See related
Ensembl:ENSSFOG00015010997
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 15
Exon count:
27
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 15 NC_041820.1 (7112679..7138591)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371478.1 (6372678..6398369)

Chromosome 15 - NC_041820.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein Q Neighboring gene glycoprotein hormones, alpha polypeptide Neighboring gene transcriptional activator Myb-like Neighboring gene solute carrier family 18 member B1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
jouberin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041820.1 Reference fSclFor1.1 Primary Assembly

    Range
    7112679..7138591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018731735.2 → XP_018587251.2  jouberin

    UniProtKB/TrEMBL
    A0A8C9RNC0, A0A8C9RNG1
    Related
    ENSSFOP00015017106.2, ENSSFOT00015017299.2
    Conserved Domains (5) summary
    PTZ00121
    Location:7 → 198
    PTZ00121; MAEBL; Provisional
    cd11812
    Location:1064 → 1115
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    PLN03218
    Location:993 → 1177
    PLN03218; maturation of RBCL 1; Provisional
    sd00039
    Location:578 → 618
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:571 → 885
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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