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spryd4 SPRY domain containing 4 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108900217, updated on 10-Apr-2024

Summary

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Gene symbol
spryd4
Gene description
SPRY domain containing 4
See related
EnsemblRapid:ENSLCAG00010030582
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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See spryd4 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
2
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG6 NC_066838.1 (19723781..19726850)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017366130.1 (753840..756983)

Linkage Group LG6 - NC_066838.1Genomic Context describing neighboring genes Neighboring gene glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic Neighboring gene uncharacterized LOC127142574 Neighboring gene acid-sensing ion channel 1 Neighboring gene glutaminase 2a (liver, mitochondrial) Neighboring gene collagen, type II, alpha 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SPRY domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066838.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    19723781..19726850
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018701168.2 → XP_018556684.1  SPRY domain-containing protein 4

    UniProtKB/TrEMBL
    A0A4W6F0G8
    Related
    ENSLCAP00010068969.1, ENSLCAT00010086411.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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