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slc16a10 solute carrier family 16 member 10 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108899312, updated on 14-Mar-2024

Summary

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Gene symbol
slc16a10
Gene description
solute carrier family 16 member 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG7_1
Exon count:
5
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG7_1 NC_066839.1 (22234920..22250792, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017366018.1 (248534..284540, complement)

Linkage Group LG7_1 - NC_066839.1Genomic Context describing neighboring genes Neighboring gene TRAF3 interacting protein 2a Neighboring gene REV3 like, DNA directed polymerase zeta catalytic subunit Neighboring gene major facilitator superfamily domain containing 4B Neighboring gene ribosome production factor 2 homolog Neighboring gene adenosylmethionine decarboxylase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monocarboxylic acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
monocarboxylate transporter 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066839.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    22234920..22250792 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018699701.2 → XP_018555217.2  monocarboxylate transporter 10

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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