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trnaa-agc transfer RNA alanine (anticodon AGC) [ Lates calcarifer (barramundi perch) ]

Gene ID: 108895117, updated on 6-Mar-2023

Summary

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Gene symbol
trnaa-agc
Gene description
transfer RNA alanine (anticodon AGC)
Gene type
tRNA
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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See trnaa-agc in Genome Data Viewer
Location:
chromosome: LG13
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG13 NC_066845.1 (27241764..27241836)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017363833.1 (692839..692911, complement)

Linkage Group LG13 - NC_066845.1Genomic Context describing neighboring genes Neighboring gene centriolin Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene transfer RNA serine (anticodon GCU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066845.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    27241764..27241836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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