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gpx7 glutathione peroxidase 7 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108892641, updated on 10-Apr-2024

Summary

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Gene symbol
gpx7
Gene description
glutathione peroxidase 7
See related
EnsemblRapid:ENSLCAG00010007610
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG17
Exon count:
3
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG17 NC_066849.1 (26030891..26034296)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017365020.1 (78143..81548)

Linkage Group LG17 - NC_066849.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108892644 Neighboring gene uncharacterized LOC108892643 Neighboring gene terminal uridylyl transferase 4 Neighboring gene phospholipase A2 inhibitor and Ly6/PLAUR domain-containing protein Neighboring gene interferon-induced protein with tetratricopeptide repeats 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutathione peroxidase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066849.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    26030891..26034296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018690319.1 → XP_018545835.1  glutathione peroxidase 7

    UniProtKB/TrEMBL
    A0A4W6CTU5, A0A4W6CUC6
    Related
    ENSLCAP00010015969.1, ENSLCAT00010016321.2
Nucleotide Protein
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Gene LinkOut

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