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fam83b family with sequence similarity 83 member B [ Lates calcarifer (barramundi perch) ]

Gene ID: 108892397, updated on 14-Mar-2024

Summary

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Gene symbol
fam83b
Gene description
family with sequence similarity 83 member B
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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See fam83b in Genome Data Viewer
Location:
chromosome: LG16_LG22
Exon count:
5
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG16_LG22 NC_066848.1 (6911916..6921709, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017364984.1 (46298..56081)

Linkage Group LG16_LG22 - NC_066848.1Genomic Context describing neighboring genes Neighboring gene GDNF family receptor alpha like Neighboring gene hypocretin (orexin) receptor 2 Neighboring gene muscular LMNA-interacting protein Neighboring gene uncharacterized LOC108892385

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM83B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066848.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    6911916..6921709 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018689910.2 → XP_018545426.1  protein FAM83B

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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