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rgs12b regulator of G protein signaling 12b [ Lates calcarifer (barramundi perch) ]

Gene ID: 108875646, updated on 10-Apr-2024

Summary

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Gene symbol
rgs12b
Gene description
regulator of G protein signaling 12b
See related
EnsemblRapid:ENSLCAG00010020767
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Also known as
rgs12
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG5
Exon count:
20
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG5 NC_066837.1 (24124333..24171097)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017367054.1 (77694..126133, complement)

Linkage Group LG5 - NC_066837.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor kinase 4 Neighboring gene small Cajal body-specific RNA 14 Neighboring gene huntingtin Neighboring gene protein Dok-7-like Neighboring gene low density lipoprotein receptor-related protein associated protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulator of G-protein signaling 12b
Names
regulator of G protein signaling 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066837.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    24124333..24171097
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018664686.2 → XP_018520202.1  regulator of G-protein signaling 12b isoform X1

    Related
    ENSLCAP00010044695.2, ENSLCAT00010045799.2

  2. XM_051070820.1 → XP_050926777.1  regulator of G-protein signaling 12b isoform X3

  3. XM_051070821.1 → XP_050926778.1  regulator of G-protein signaling 12b isoform X4

    UniProtKB/TrEMBL
    A0A4W6F015
    Related
    ENSLCAP00010044705.1, ENSLCAT00010045809.2

  4. XM_018664687.2 → XP_018520203.1  regulator of G-protein signaling 12b isoform X1

  5. XM_051070819.1 → XP_050926776.1  regulator of G-protein signaling 12b isoform X2

    UniProtKB/TrEMBL
    A0A4W6EZY5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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