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lrrc2 leucine rich repeat containing 2 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108875353, updated on 10-Apr-2024

Summary

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Gene symbol
lrrc2
Gene description
leucine rich repeat containing 2
See related
EnsemblRapid:ENSLCAG00010014305
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG13
Exon count:
10
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG13 NC_066845.1 (27050265..27057706, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017363852.1 (662939..671512, complement)

Linkage Group LG13 - NC_066845.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108875334 Neighboring gene major facilitator superfamily domain containing 14Bb Neighboring gene uncharacterized LOC127143178 Neighboring gene uncharacterized LOC127143179 Neighboring gene family with sequence similarity 240 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Small-scale transcriptomics reveals differences among gonadal stages in Asian seabass (Lates calcarifer). Ravi P, et al. Reprod Biol Endocrinol, 2014 Jan 9. PMID 24405829, Free PMC Article
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066845.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    27050265..27057706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018664215.2 → XP_018519731.1  leucine-rich repeat-containing protein 2

    UniProtKB/TrEMBL
    A0A4W6DZ93
    Related
    ENSLCAP00010030401.1, ENSLCAT00010031088.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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