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znf710a zinc finger protein 710a [ Lates calcarifer (barramundi perch) ]

Gene ID: 108875323, updated on 10-Apr-2024

Summary

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Gene symbol
znf710a
Gene description
zinc finger protein 710a
See related
EnsemblRapid:ENSLCAG00010005813
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Also known as
znf710
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG10
Exon count:
5
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG10 NC_066842.1 (12795977..12802394, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017367005.1 (400464..407841, complement)

Linkage Group LG10 - NC_066842.1Genomic Context describing neighboring genes Neighboring gene retinol dehydrogenase 13 Neighboring gene ankyrin repeat domain 34C Neighboring gene isocitrate dehydrogenase (NADP(+)) 2 Neighboring gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba Neighboring gene RAS and EF-hand domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 710a
Names
zinc finger protein 710

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066842.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    12795977..12802394 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018664147.2 → XP_018519663.1  zinc finger protein 710a isoform X2

  2. XM_018664146.2 → XP_018519662.1  zinc finger protein 710a isoform X1

    UniProtKB/TrEMBL
    A0A4W6CFC4
    Related
    ENSLCAP00010012271.1, ENSLCAT00010012543.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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