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unk unk zinc finger [ Lates calcarifer (barramundi perch) ]

Gene ID: 108872504, updated on 10-Apr-2024

Summary

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Gene symbol
unk
Gene description
unk zinc finger
See related
EnsemblRapid:ENSLCAG00010022350
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG8
Exon count:
15
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG8 NC_066840.1 (14215725..14222760, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017366499.1 (2147318..2154461)

Linkage Group LG8 - NC_066840.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L38 Neighboring gene tripartite motif containing 65 Neighboring gene WW domain binding protein 2 Neighboring gene unc-13 homolog D (C. elegans) Neighboring gene histone H3.3A Neighboring gene uncharacterized si:ch211-250n8.1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Zoccola E, et al. Mol Immunol, 2017 Mar. PMID 28095348
  2. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA CDS binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell morphogenesis involved in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein unkempt homolog
Names
unkempt family zinc finger

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066840.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    14215725..14222760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018660190.2 → XP_018515706.1  RING finger protein unkempt homolog isoform X1

    UniProtKB/TrEMBL
    A0A4W6FC49
    Related
    ENSLCAP00010065737.1, ENSLCAT00010092697.1

  2. XM_018660191.2 → XP_018515707.1  RING finger protein unkempt homolog isoform X2

    UniProtKB/TrEMBL
    A0A4W6FC49
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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