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TAF15 TATA-box binding protein associated factor 15 [ Rhinopithecus bieti (black snub-nosed monkey) ]

Gene ID: 108541454, updated on 14-Mar-2024

Summary

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Gene symbol
TAF15
Gene description
TATA-box binding protein associated factor 15
See related
Ensembl:ENSRBIG00000043192
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus bieti
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM169854v1 (GCF_001698545.1) Unplaced Scaffold NW_016809955.1 (477951..519448)

NW_016809955.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C17orf50 homolog Neighboring gene matrix metallopeptidase 28 Neighboring gene probable ribosome biogenesis protein RLP24 pseudogene Neighboring gene HEAT repeat containing 9 Neighboring gene C-C motif chemokine ligand 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016809955.1 Unplaced Scaffold Reference ASM169854v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TATA-binding protein-associated factor 2N

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus bieti Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM169854v1 Primary Assembly

Genomic

  1. NW_016809955.1 Reference ASM169854v1 Primary Assembly

    Range
    477951..519448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017890999.1 → XP_017746488.1  TATA-binding protein-associated factor 2N isoform X1

    UniProtKB/TrEMBL
    A0A2K6MUN5, A0A2K6MUP4
    Related
    ENSRBIP00000039486.1, ENSRBIT00000063511.1
    Conserved Domains (5) summary
    cd12535
    Location:232 → 317
    RRM_FUS_TAF15; RNA recognition motif in vertebrate fused in Ewing's sarcoma protein (FUS), TATA-binding protein-associated factor 15 (TAF15) and similar proteins
    TIGR01622
    Location:136 → 315
    SF-CC1; splicing factor, CC1-like family
    sd00025
    Location:358 → 379
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam09606
    Location:5 → 147
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam00641
    Location:355 → 384
    zf-RanBP; Zn-finger in Ran binding protein and others

  2. XM_017891000.1 → XP_017746489.1  TATA-binding protein-associated factor 2N isoform X2

    UniProtKB/TrEMBL
    A0A2K6MUP4
    Conserved Domains (4) summary
    cd12535
    Location:229 → 314
    RRM_FUS_TAF15; RNA recognition motif in vertebrate fused in Ewing's sarcoma protein (FUS), TATA-binding protein-associated factor 15 (TAF15) and similar proteins
    TIGR01622
    Location:133 → 312
    SF-CC1; splicing factor, CC1-like family
    sd00029
    Location:355 → 376
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:352 → 381
    zf-RanBP; Zn-finger in Ran binding protein and others
Nucleotide Protein
Heading Accession and Version

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