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RFX2 regulatory factor X2 [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108507989, updated on 14-Mar-2024

Summary

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Gene symbol
RFX2
Gene description
regulatory factor X2
See related
Ensembl:ENSLCOG00000008922
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
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Genomic context

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See RFX2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690457.1 (210851..275476)

NW_016690457.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase bubblegum family member 2 Neighboring gene alkaline ceramidase 1 Neighboring gene MLLT1 super elongation complex subunit Neighboring gene la-related protein 6-like Neighboring gene IFI30 lysosomal thiol reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016690457.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein RFX2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690457.1 Reference Lepidothrix_coronata-1.0

    Range
    210851..275476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017836429.1 → XP_017691918.1  DNA-binding protein RFX2 isoform X1

    UniProtKB/TrEMBL
    A0A6J0IYY5

  2. XM_017836433.1 → XP_017691922.1  DNA-binding protein RFX2 isoform X2

    UniProtKB/TrEMBL
    A0A6J0IZ47
    Related
    ENSLCOP00000012447.1, ENSLCOT00000013198.1

  3. XM_017836434.1 → XP_017691923.1  DNA-binding protein RFX2 isoform X3

    UniProtKB/TrEMBL
    A0A6J0IYY9

  4. XM_017836435.1 → XP_017691924.1  DNA-binding protein RFX2 isoform X4

    UniProtKB/TrEMBL
    A0A6J0J102

  5. XM_017836430.1 → XP_017691919.1  DNA-binding protein RFX2 isoform X1

    UniProtKB/TrEMBL
    A0A6J0IYY5
    Related
    ENSLCOP00000012446.1, ENSLCOT00000013197.1

  6. XM_017836432.1 → XP_017691921.1  DNA-binding protein RFX2 isoform X1

    UniProtKB/TrEMBL
    A0A6J0IYY5
Nucleotide Protein
Heading Accession and Version

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