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CNN2 calponin 2 [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108506924, updated on 14-Mar-2024

Summary

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Gene symbol
CNN2
Gene description
calponin 2
See related
Ensembl:ENSLCOG00000013333
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
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Genomic context

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See CNN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690413.1 (523401..527506, complement)

NW_016690413.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 259 Neighboring gene ATP binding cassette subfamily A member 7 Neighboring gene Rho GTPase activating protein 45 Neighboring gene uncharacterized LOC108506937 Neighboring gene RNA polymerase II, I and III subunit E

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016690413.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calponin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690413.1 Reference Lepidothrix_coronata-1.0

    Range
    523401..527506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017834380.1 → XP_017689869.1  calponin-2

    UniProtKB/TrEMBL
    A0A6J0IUX5
    Related
    ENSLCOP00000018861.1, ENSLCOT00000019923.1
    Conserved Domains (2) summary
    pfam00402
    Location:166 → 190
    Calponin; Calponin family repeat
    cd21283
    Location:27 → 135
    CH_CNN2; calponin homology (CH) domain found in calponin-2
Nucleotide Protein
Heading Accession and Version

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