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SYNPR synaptoporin [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108503154, updated on 14-Mar-2024

Summary

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Gene symbol
SYNPR
Gene description
synaptoporin
See related
Ensembl:ENSLCOG00000012471
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690311.1 (1105321..1209309)

NW_016690311.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108503142 Neighboring gene centrosomal protein 15 Neighboring gene calcium dependent secretion activator Neighboring gene sentan, cilia apical structure protein Neighboring gene THO complex subunit 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016690311.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptoporin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690311.1 Reference Lepidothrix_coronata-1.0

    Range
    1105321..1209309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017826904.1 → XP_017682393.1  synaptoporin isoform X2

    UniProtKB/TrEMBL
    A0A6J0I6V4
    Related
    ENSLCOP00000017633.1, ENSLCOT00000018625.1

  2. XM_017826903.1 → XP_017682392.1  synaptoporin isoform X1

    UniProtKB/TrEMBL
    A0A6J0I6V9
    Related
    ENSLCOP00000017634.1, ENSLCOT00000018626.1
    Conserved Domains (1) summary
    pfam01284
    Location:68 → 196
    MARVEL; Membrane-associating domain
Nucleotide Protein
Heading Accession and Version

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