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TRIM55 tripartite motif containing 55 [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108496087, updated on 14-Mar-2024

Summary

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Gene symbol
TRIM55
Gene description
tripartite motif containing 55
See related
Ensembl:ENSLCOG00000003585
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
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Genomic context

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See TRIM55 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690216.1 (596250..631475)

NW_016690216.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene uncharacterized LOC108496051 Neighboring gene corticotropin releasing hormone Neighboring gene ribosome biogenesis regulator 1 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016690216.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tripartite motif-containing protein 55

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690216.1 Reference Lepidothrix_coronata-1.0

    Range
    596250..631475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017812500.1 → XP_017667989.1  tripartite motif-containing protein 55 isoform X1

    UniProtKB/TrEMBL
    A0A6J0H2R6

  2. XM_017812502.1 → XP_017667991.1  tripartite motif-containing protein 55 isoform X3

    UniProtKB/TrEMBL
    A0A6J0H1M7

  3. XM_017812501.1 → XP_017667990.1  tripartite motif-containing protein 55 isoform X2

    UniProtKB/TrEMBL
    A0A6J0H1S2
    Related
    ENSLCOP00000004747.1, ENSLCOT00000005066.1
Nucleotide Protein
Heading Accession and Version

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