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stx5al syntaxin 5A, like [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108439768, updated on 14-Mar-2024

Summary

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Gene symbol
stx5al
Gene description
syntaxin 5A, like
See related
EnsemblRapid:ENSPNAG00000032463
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Also known as
stx5
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 16 NC_051226.1 (20822823..20828279, complement)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016244080.1 (660069..665504)

Chromosome 16 - NC_051226.1Genomic Context describing neighboring genes Neighboring gene estrogen-related receptor alpha Neighboring gene uncharacterized LOC108439770 Neighboring gene potassium channel subfamily K member 4 Neighboring gene vascular endothelial growth factor A Neighboring gene CAAX prenyl protease 2 Neighboring gene adenylosuccinate synthase, like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin 5A, like
Names
syntaxin 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051226.1 Reference fPygNat1.pri

    Range
    20822823..20828279 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017718354.2 → XP_017573843.1  syntaxin 5A, like

    UniProtKB/TrEMBL
    A0A3B4C214
    Related
    ENSPNAP00000067286.1, ENSPNAT00000050295.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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