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tmc5 transmembrane channel like 5 [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108439754, updated on 14-Mar-2024

Summary

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Gene symbol
tmc5
Gene description
transmembrane channel like 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
human zebrafish all
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Genomic context

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See tmc5 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
22
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 14 NC_051224.1 (40774434..40798168, complement)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016244079.1 (503972..527566, complement)

Chromosome 14 - NC_051224.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class Q Neighboring gene RAB40c, member RAS oncogene family Neighboring gene xylosyltransferase I Neighboring gene ribosomal protein S15a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mechanosensitive monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane channel-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051224.1 Reference fPygNat1.pri

    Range
    40774434..40798168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017718328.2 → XP_017573817.1  transmembrane channel-like protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A3B4C4A0

  2. XM_017718329.2 → XP_017573818.1  transmembrane channel-like protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A3B4C4A0
Nucleotide Protein
Heading Accession and Version

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