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trappc9 trafficking protein particle complex 9 [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108438238, updated on 14-Mar-2024

Summary

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Gene symbol
trappc9
Gene description
trafficking protein particle complex 9
See related
EnsemblRapid:ENSPNAG00000005622
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 11
Exon count:
24
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 11 NC_051221.1 (9781996..10165321)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016244018.1 (355570..726153)

Chromosome 11 - NC_051221.1Genomic Context describing neighboring genes Neighboring gene MYST/Esa1-associated factor 6 Neighboring gene four and a half LIM domains 3b Neighboring gene potassium channel, subfamily K, member 9 Neighboring gene uncharacterized LOC108438241

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051221.1 Reference fPygNat1.pri

    Range
    9781996..10165321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017715936.2 → XP_017571425.1  trafficking protein particle complex subunit 9 isoform X2

    UniProtKB/TrEMBL
    A0A3B4EMI8
    Related
    ENSPNAP00000072153.1, ENSPNAT00000042659.1

  2. XM_017715935.2 → XP_017571424.1  trafficking protein particle complex subunit 9 isoform X1

    UniProtKB/TrEMBL
    A0A3B4EPG5
    Related
    ENSPNAP00000037164.2, ENSPNAT00000040574.2
    Conserved Domains (1) summary
    pfam08626
    Location:16 → 1069
    TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

  3. XM_037542854.1 → XP_037398751.1  trafficking protein particle complex subunit 9 isoform X1

    UniProtKB/TrEMBL
    A0A3B4EPG5
    Related
    ENSPNAP00000081621.1, ENSPNAT00000078739.1
    Conserved Domains (1) summary
    pfam08626
    Location:16 → 1069
    TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

  4. XM_037542855.1 → XP_037398752.1  trafficking protein particle complex subunit 9 isoform X3

    UniProtKB/TrEMBL
    A0A3B4EPG5
    Conserved Domains (1) summary
    pfam08626
    Location:16 → 894
    TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit
Nucleotide Protein
Heading Accession and Version

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