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grik3 glutamate ionotropic receptor kainate type subunit 3 [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108433587, updated on 14-Mar-2024

Summary

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Gene symbol
grik3
Gene description
glutamate ionotropic receptor kainate type subunit 3
See related
EnsemblRapid:ENSPNAG00000003389
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
zebrafish all
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Genomic context

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See grik3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 3 NC_051213.1 (22639527..22766215)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016243893.1 (1194165..1315290)

Chromosome 3 - NC_051213.1Genomic Context describing neighboring genes Neighboring gene endoribonuclease ZC3H12A Neighboring gene uncharacterized LOC119263113 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene colony stimulating factor 3 receptor Neighboring gene mitochondrial ribosomal protein S15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables kainate selective glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of kainate selective glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor ionotropic, kainate 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051213.1 Reference fPygNat1.pri

    Range
    22639527..22766215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037537028.1 → XP_037392925.1  glutamate receptor ionotropic, kainate 3

    UniProtKB/TrEMBL
    A0A3B4E0Z9
    Related
    ENSPNAP00000029390.1, ENSPNAT00000016446.2
    Conserved Domains (2) summary
    cd06382
    Location:37 → 415
    PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
    cl21456
    Location:431 → 799
    Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
Nucleotide Protein
Heading Accession and Version

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