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slc6a9 solute carrier family 6 member 9 [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108430292, updated on 14-Mar-2024

Summary

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Gene symbol
slc6a9
Gene description
solute carrier family 6 member 9
See related
EnsemblRapid:ENSPNAG00000000980
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
human zebrafish all
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Genomic context

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See slc6a9 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 2 NC_051212.1 (38727920..38783782)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016243840.1 (2252395..2304579)

Chromosome 2 - NC_051212.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 220a Neighboring gene Kruppel-like factor 17 Neighboring gene coiled-coil domain containing 24 Neighboring gene uncharacterized LOC108430294 Neighboring gene UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycine:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glycinergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent glycine transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051212.1 Reference fPygNat1.pri

    Range
    38727920..38783782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017702696.2 → XP_017558185.1  sodium- and chloride-dependent glycine transporter 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B4BTF7, A0A3B4DKB5
    Related
    ENSPNAP00000023915.1, ENSPNAT00000011445.2

  2. XM_017702695.2 → XP_017558184.1  sodium- and chloride-dependent glycine transporter 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B4BTF7, A0A3B4DKB5
    Related
    ENSPNAP00000001826.2, ENSPNAT00000011488.2

  3. XM_017702697.2 → XP_017558186.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4BTF7, A0A3B4DHQ2
    Related
    ENSPNAP00000023927.1, ENSPNAT00000011467.2
Nucleotide Protein
Heading Accession and Version

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