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trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108429789, updated on 14-Mar-2024

Summary

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Gene symbol
trmt10c
Gene description
tRNA methyltransferase 10C, mitochondrial RNase P subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 12 NC_051222.1 (15790858..15792671)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016243833.1 (1049167..1050985, complement)

Chromosome 12 - NC_051222.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108429842 Neighboring gene thioredoxin-like 4B Neighboring gene basic leucine zipper nuclear factor 1 Neighboring gene excision repair cross-complementation group 5 Neighboring gene methyltransferase like 21e

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial tRNA 5'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of mitochondrial translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA methyltransferase 10 homolog C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051222.1 Reference fPygNat1.pri

    Range
    15790858..15792671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017701800.2 → XP_017557289.1  tRNA methyltransferase 10 homolog C

Nucleotide Protein
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