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zhx3b zinc fingers and homeoboxes 3b [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108427762, updated on 14-Mar-2024

Summary

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Gene symbol
zhx3b
Gene description
zinc fingers and homeoboxes 3b
See related
EnsemblRapid:ENSPNAG00000035012
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Also known as
zhx3
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 9 NC_051219.1 (26505991..26529952, complement)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016243810.1 (1353437..1377357, complement)

Chromosome 9 - NC_051219.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase Ib Neighboring gene phospholipase C, gamma 1 Neighboring gene RAB5 interacting factor Neighboring gene DEAH-box helicase 35

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc fingers and homeoboxes protein 3
Names
zinc fingers and homeoboxes 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051219.1 Reference fPygNat1.pri

    Range
    26505991..26529952 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017698227.2 → XP_017553716.2  zinc fingers and homeoboxes protein 3

    UniProtKB/TrEMBL
    A0A3B4D2S6
    Related
    ENSPNAP00000039344.1, ENSPNAT00000046536.1
    Conserved Domains (3) summary
    smart00389
    Location:791 → 836
    HOX; Homeodomain
    cd00086
    Location:656 → 709
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam18387
    Location:99 → 148
    zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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