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TONSL tonsoku like, DNA repair protein [ Manis javanica (Malayan pangolin) ]

Gene ID: 108407736, updated on 14-Mar-2024

Summary

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Gene symbol
TONSL
Gene description
tonsoku like, DNA repair protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See TONSL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436087.1 (4280583..4292446)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016543623.1 (92039..104408, complement)

NW_023436087.1Genomic Context describing neighboring genes Neighboring gene cysteine and histidine-rich protein 1 Neighboring gene uncharacterized LOC118973369 Neighboring gene VPS28 subunit of ESCRT-I Neighboring gene solute carrier family 39 member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tonsoku-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436087.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    4280583..4292446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017677286.2 → XP_017532775.2  tonsoku-like protein

    Conserved Domains (7) summary
    PHA03307
    Location:708 → 979
    PHA03307; transcriptional regulator ICP4; Provisional
    COG0457
    Location:246 → 477
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00033
    Location:1113 → 1140
    LRR_RI; leucine-rich repeat [structural motif]
    sd00006
    Location:221 → 249
    TPR; TPR repeat [structural motif]
    sd00045
    Location:584 → 614
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:588 → 682
    Ank_2; Ankyrin repeats (3 copies)
    cl39015
    Location:1094 → 1356
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
Nucleotide Protein
Heading Accession and Version

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