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ZNF518A zinc finger protein 518A [ Manis javanica (Malayan pangolin) ]

Gene ID: 108406329, updated on 14-Mar-2024

Summary

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Gene symbol
ZNF518A
Gene description
zinc finger protein 518A
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436001.1 (3515883..3633112)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016528069.1 (110248..227336)

NW_023436001.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108394919 Neighboring gene coiled-coil and C2 domain containing 2B Neighboring gene cyclin J Neighboring gene B cell linker Neighboring gene DNA nucleotidylexotransferase Neighboring gene oligodendrocytic myelin paranodal and inner loop protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 518A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436001.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    3515883..3633112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037015648.1 → XP_036871543.1  zinc finger protein 518A isoform X1

    Conserved Domains (2) summary
    sd00017
    Location:207 → 227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:119 → 141
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_017674997.2 → XP_017530486.2  zinc finger protein 518A isoform X1

    Conserved Domains (2) summary
    sd00017
    Location:207 → 227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:119 → 141
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_037015650.1 → XP_036871545.1  zinc finger protein 518A isoform X1

    Conserved Domains (2) summary
    sd00017
    Location:207 → 227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:119 → 141
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_017674974.2 → XP_017530463.2  zinc finger protein 518A isoform X1

    Conserved Domains (2) summary
    sd00017
    Location:207 → 227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:119 → 141
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_037015652.1 → XP_036871547.1  zinc finger protein 518A isoform X2

  6. XM_017674991.2 → XP_017530480.2  zinc finger protein 518A isoform X1

    Conserved Domains (2) summary
    sd00017
    Location:207 → 227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:119 → 141
    ZF_C2H2; C2H2 Zn finger [structural motif]

  7. XM_017674982.2 → XP_017530471.2  zinc finger protein 518A isoform X1

    Conserved Domains (2) summary
    sd00017
    Location:207 → 227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:119 → 141
    ZF_C2H2; C2H2 Zn finger [structural motif]

  8. XM_037015651.1 → XP_036871546.1  zinc finger protein 518A isoform X1

    Conserved Domains (2) summary
    sd00017
    Location:207 → 227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:119 → 141
    ZF_C2H2; C2H2 Zn finger [structural motif]

  9. XM_037015649.1 → XP_036871544.1  zinc finger protein 518A isoform X1

    Conserved Domains (2) summary
    sd00017
    Location:207 → 227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:119 → 141
    ZF_C2H2; C2H2 Zn finger [structural motif]

RNA

  1. XR_005060648.1 RNA Sequence

  2. XR_005060647.1 RNA Sequence

  3. XR_001855448.2 RNA Sequence

Nucleotide Protein
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