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BRAP BRCA1 associated protein [ Manis javanica (Malayan pangolin) ]

Gene ID: 108400553, updated on 14-Mar-2024

Summary

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Gene symbol
BRAP
Gene description
BRCA1 associated protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See BRAP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023435991.1 (614968..654171)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016535625.1 (953754..994088, complement)

NW_023435991.1Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase 2 family member Neighboring gene acyl-CoA dehydrogenase family member 10 Neighboring gene BRCA1-associated protein-like Neighboring gene uncharacterized LOC108400544 Neighboring gene uncharacterized LOC118971681 Neighboring gene ataxin 2 Neighboring gene histamine N-methyltransferase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Ras protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BRCA1-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023435991.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    614968..654171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017665983.2 → XP_017521472.1  BRCA1-associated protein isoform X1

  2. XM_037014550.1 → XP_036870445.1  BRCA1-associated protein isoform X2

    Conserved Domains (4) summary
    COG1196
    Location:395 → 533
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd16457
    Location:260 → 303
    RING-H2_BRAP2; RING finger, H2 subclass, found in BRCA1-associated protein (BRAP2) and similar proteins
    pfam02148
    Location:315 → 377
    zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
    cd12718
    Location:158 → 241
    RRM_BRAP2; RNA recognition motif (RRM) found in BRCA1-associated protein (BRAP2)
Nucleotide Protein
Heading Accession and Version

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