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MYO5A myosin VA [ Manis javanica (Malayan pangolin) ]

Gene ID: 108395260, updated on 14-Mar-2024

Summary

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Gene symbol
MYO5A
Gene description
myosin VA
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
42
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436060.1 (1838059..2028874, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016531711.1 (312426..408649, complement)

NW_023436060.1Genomic Context describing neighboring genes Neighboring gene G protein subunit beta 5 Neighboring gene myosin VC Neighboring gene cAMP regulated phosphoprotein 19 Neighboring gene atos homolog A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microfilament motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle transport along actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
unconventional myosin-Va

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436060.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    1838059..2028874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037021017.1 → XP_036876912.1  unconventional myosin-Va isoform X7

    Conserved Domains (3) summary
    COG5022
    Location:7 → 1448
    COG5022; Myosin heavy chain [General function prediction only]
    cd15478
    Location:1506 → 1880
    Myo5a_CBD; Cargo binding domain of myosin 5a
    cd01380
    Location:83 → 751
    MYSc_Myo5; class V myosin, motor domain

  2. XM_037021011.1 → XP_036876906.1  unconventional myosin-Va isoform X1

    Conserved Domains (4) summary
    COG1196
    Location:1155 → 1481
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5022
    Location:7 → 1291
    COG5022; Myosin heavy chain [General function prediction only]
    cd15478
    Location:1503 → 1877
    Myo5a_CBD; Cargo binding domain of myosin 5a
    cd01380
    Location:83 → 751
    MYSc_Myo5; class V myosin, motor domain

  3. XM_037021013.1 → XP_036876908.1  unconventional myosin-Va isoform X3

    Conserved Domains (6) summary
    smart00015
    Location:813 → 835
    IQ; Calmodulin-binding motif
    COG1196
    Location:1155 → 1457
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15478
    Location:1479 → 1853
    Myo5a_CBD; Cargo binding domain of myosin 5a
    TIGR02168
    Location:902 → 1281
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd01380
    Location:83 → 751
    MYSc_Myo5; class V myosin, motor domain
    cd21759
    Location:829 → 862
    CBD_MYO6-like; calmodulin binding domain found in unconventional myosin-VI and similar proteins

  4. XM_037021015.1 → XP_036876910.1  unconventional myosin-Va isoform X5

    Conserved Domains (4) summary
    COG1196
    Location:1157 → 1454
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5022
    Location:7 → 1291
    COG5022; Myosin heavy chain [General function prediction only]
    cd15478
    Location:1476 → 1850
    Myo5a_CBD; Cargo binding domain of myosin 5a
    cd01380
    Location:83 → 751
    MYSc_Myo5; class V myosin, motor domain

  5. XM_037021014.1 → XP_036876909.1  unconventional myosin-Va isoform X4

    Conserved Domains (4) summary
    COG1196
    Location:1157 → 1442
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5022
    Location:7 → 1291
    COG5022; Myosin heavy chain [General function prediction only]
    cd15478
    Location:1478 → 1852
    Myo5a_CBD; Cargo binding domain of myosin 5a
    cd01380
    Location:83 → 751
    MYSc_Myo5; class V myosin, motor domain

  6. XM_037021012.1 → XP_036876907.1  unconventional myosin-Va isoform X2

    Conserved Domains (5) summary
    smart00015
    Location:813 → 835
    IQ; Calmodulin-binding motif
    cd15478
    Location:1481 → 1855
    Myo5a_CBD; Cargo binding domain of myosin 5a
    TIGR02168
    Location:902 → 1444
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd01380
    Location:83 → 751
    MYSc_Myo5; class V myosin, motor domain
    cd21759
    Location:829 → 862
    CBD_MYO6-like; calmodulin binding domain found in unconventional myosin-VI and similar proteins

  7. XM_037021016.1 → XP_036876911.1  unconventional myosin-Va isoform X6

    Conserved Domains (5) summary
    smart00015
    Location:813 → 835
    IQ; Calmodulin-binding motif
    COG0419
    Location:900 → 1417
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd15478
    Location:1454 → 1828
    Myo5a_CBD; Cargo binding domain of myosin 5a
    cd01380
    Location:83 → 751
    MYSc_Myo5; class V myosin, motor domain
    cd21759
    Location:829 → 862
    CBD_MYO6-like; calmodulin binding domain found in unconventional myosin-VI and similar proteins
Nucleotide Protein
Heading Accession and Version

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