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NPAS4 neuronal PAS domain protein 4 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108394848, updated on 14-Mar-2024

Summary

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Gene symbol
NPAS4
Gene description
neuronal PAS domain protein 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See NPAS4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436166.1 (4654340..4660810)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016531483.1 (29590..35356, complement)

NW_023436166.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene solute carrier family 29 member 2 Neighboring gene mitochondrial ribosomal protein L11 Neighboring gene pellino E3 ubiquitin protein ligase family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuronal PAS domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436166.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    4654340..4660810
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017656684.2 → XP_017512173.1  neuronal PAS domain-containing protein 4 isoform X1

  2. XM_017656685.2 → XP_017512174.1  neuronal PAS domain-containing protein 4 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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