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LOC108394028 YKT6 v-SNARE homolog [ Manis javanica (Malayan pangolin) ]

Gene ID: 108394028, updated on 16-Nov-2023

Summary

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Gene symbol
LOC108394028
Gene description
YKT6 v-SNARE homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Also known as
YKT6
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436130.1 (514165..523772)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016530824.1 (133276..145267)

NW_023436130.1Genomic Context describing neighboring genes Neighboring gene myosin light chain 7 Neighboring gene glucokinase Neighboring gene synaptobrevin homolog YKT6-like Neighboring gene calcium/calmodulin dependent protein kinase II beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptobrevin homolog YKT6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436130.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    514165..523772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036990959.1 → XP_036846854.1  synaptobrevin homolog YKT6 isoform X2

    Conserved Domains (2) summary
    COG5143
    Location:3 → 163
    SNC1; Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion]
    cd15867
    Location:101 → 160
    R-SNARE_YKT6; SNARE motif of YKT6

  2. XM_017655287.2 → XP_017510776.1  synaptobrevin homolog YKT6 isoform X1

Nucleotide Protein
Heading Accession and Version

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