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HMGCLL1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 [ Manis javanica (Malayan pangolin) ]

Gene ID: 108390567, updated on 11-Apr-2024

Summary

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Gene symbol
HMGCLL1
Gene description
3-hydroxy-3-methylglutaryl-CoA lyase like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436057.1 (393647..551169)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016528880.1 (2906..154586, complement)

NW_023436057.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108384453 Neighboring gene bone morphogenetic protein 5 Neighboring gene 40S ribosomal protein S7-like Neighboring gene GDNF family receptor alpha like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxymethylglutaryl-CoA lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-leucine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ketone body biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic
Names
3-hydroxymethyl-3-methylglutaryl-CoA lyase L1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436057.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    393647..551169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037020820.1 → XP_036876715.1  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic

    Conserved Domains (1) summary
    cl21457
    Location:41 → 304
    TIM; TIM-like beta/alpha barrel domains
Nucleotide Protein
Heading Accession and Version

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