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NPTN neuroplastin [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108317504, updated on 14-Mar-2024

Summary

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Gene symbol
NPTN
Gene description
neuroplastin
See related
Ensembl:ENSCCAG00000035299
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107518.1 (1326638..1399474)

NW_016107518.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119474030 Neighboring gene inhibitory synaptic factor 1 Neighboring gene CD276 molecule Neighboring gene REC114 meiotic recombination protein Neighboring gene hyperpolarization activated cyclic nucleotide gated potassium channel 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107518 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
neuroplastin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107518.1 Reference Cebus_imitator-1.0

    Range
    1326638..1399474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017548060.1 → XP_017403549.1  neuroplastin isoform X1

    UniProtKB/TrEMBL
    A0A2K5S2R2
    Related
    ENSCCAP00000034693.1, ENSCCAT00000052468.1
    Conserved Domains (3) summary
    pfam13927
    Location:238 → 320
    Ig_3; Immunoglobulin domain
    cd00096
    Location:32 → 36
    Ig; Ig strand A [structural motif]
    cl11960
    Location:31 → 146
    Ig; Immunoglobulin domain

  2. XM_017548061.1 → XP_017403550.1  neuroplastin isoform X2

    Conserved Domains (3) summary
    pfam13927
    Location:238 → 320
    Ig_3; Immunoglobulin domain
    cd00096
    Location:32 → 36
    Ig; Ig strand A [structural motif]
    cl11960
    Location:31 → 146
    Ig; Immunoglobulin domain

  3. XM_017548064.1 → XP_017403553.1  neuroplastin isoform X3

    UniProtKB/TrEMBL
    A0A2K5S2S9
    Related
    ENSCCAP00000034694.1, ENSCCAT00000052469.1
    Conserved Domains (3) summary
    pfam13927
    Location:122 → 204
    Ig_3; Immunoglobulin domain
    cd00096
    Location:139 → 146
    Ig; Ig strand B [structural motif]
    cl11960
    Location:39 → 115
    Ig; Immunoglobulin domain

  4. XM_017548065.1 → XP_017403554.1  neuroplastin isoform X4

    Conserved Domains (3) summary
    pfam13927
    Location:122 → 204
    Ig_3; Immunoglobulin domain
    cd00096
    Location:139 → 146
    Ig; Ig strand B [structural motif]
    cl11960
    Location:39 → 115
    Ig; Immunoglobulin domain
Nucleotide Protein
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