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TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108317183, updated on 14-Mar-2024

Summary

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Gene symbol
TANC1
Gene description
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
See related
Ensembl:ENSCCAG00000034191
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See TANC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107325.1 (3287954..3550328)

NW_016107325.1Genomic Context describing neighboring genes Neighboring gene death associated protein like 1 Neighboring gene U2 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene glutathione S-transferase Mu 3-like Neighboring gene WD repeat, sterile alpha motif and U-box domain containing 1 Neighboring gene bromodomain adjacent to zinc finger domain 2B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107325 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of postsynapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein TANC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107325.1 Reference Cebus_imitator-1.0

    Range
    3287954..3550328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037745373.1 → XP_037601301.1  protein TANC1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5RWJ1
    Conserved Domains (6) summary
    PHA03095
    Location:906 → 1290
    PHA03095; ankyrin-like protein; Provisional
    PHA03307
    Location:25 → 319
    PHA03307; transcriptional regulator ICP4; Provisional
    COG0457
    Location:1286 → 1440
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:1316 → 1341
    TPR; TPR repeat [structural motif]
    sd00045
    Location:1169 → 1199
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1140 → 1232
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_017547471.2 → XP_017402960.1  protein TANC1 isoform X4

    UniProtKB/TrEMBL
    A0A2K5RWI2, A0A2K5RWJ1
    Related
    ENSCCAP00000032507.1, ENSCCAT00000050264.1

  3. XM_037745386.1 → XP_037601314.1  protein TANC1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5RWJ1
    Conserved Domains (6) summary
    PHA03095
    Location:899 → 1283
    PHA03095; ankyrin-like protein; Provisional
    PHA03307
    Location:25 → 319
    PHA03307; transcriptional regulator ICP4; Provisional
    COG0457
    Location:1279 → 1433
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:1309 → 1334
    TPR; TPR repeat [structural motif]
    sd00045
    Location:1162 → 1192
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1133 → 1225
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_017547502.2 → XP_017402991.1  protein TANC1 isoform X5

    UniProtKB/TrEMBL
    A0A2K5RWJ1

  5. XM_037745380.1 → XP_037601308.1  protein TANC1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5RWJ1
    Conserved Domains (5) summary
    PHA03095
    Location:905 → 1289
    PHA03095; ankyrin-like protein; Provisional
    COG0457
    Location:1285 → 1439
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:1315 → 1340
    TPR; TPR repeat [structural motif]
    sd00045
    Location:1168 → 1198
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1139 → 1231
    Ank_2; Ankyrin repeats (3 copies)

  6. XM_017547511.2 → XP_017403000.1  protein TANC1 isoform X6

    UniProtKB/TrEMBL
    A0A2K5RWJ1

  7. XM_037745393.1 → XP_037601321.1  protein TANC1 isoform X9

    UniProtKB/TrEMBL
    A0A2K5RWJ1
    Conserved Domains (5) summary
    COG0457
    Location:1180 → 1334
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:1210 → 1235
    TPR; TPR repeat [structural motif]
    sd00045
    Location:1063 → 1093
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:832 → 915
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:1010 → 1186
    Ank_2; Ankyrin repeats (3 copies)

  8. XM_037745389.1 → XP_037601317.1  protein TANC1 isoform X7

    UniProtKB/TrEMBL
    A0A2K5RWJ1
    Conserved Domains (5) summary
    COG0457
    Location:1225 → 1379
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:1255 → 1280
    TPR; TPR repeat [structural motif]
    sd00045
    Location:1108 → 1138
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:877 → 960
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:1055 → 1231
    Ank_2; Ankyrin repeats (3 copies)

  9. XM_037745378.1 → XP_037601306.1  protein TANC1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5RWJ1
    Conserved Domains (6) summary
    PHA03095
    Location:906 → 1290
    PHA03095; ankyrin-like protein; Provisional
    PHA03307
    Location:25 → 319
    PHA03307; transcriptional regulator ICP4; Provisional
    COG0457
    Location:1286 → 1440
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:1316 → 1341
    TPR; TPR repeat [structural motif]
    sd00045
    Location:1169 → 1199
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1140 → 1232
    Ank_2; Ankyrin repeats (3 copies)

  10. XM_037745392.1 → XP_037601320.1  protein TANC1 isoform X8

    UniProtKB/TrEMBL
    A0A2K5RWJ1
    Conserved Domains (5) summary
    COG0457
    Location:1180 → 1334
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:1210 → 1235
    TPR; TPR repeat [structural motif]
    sd00045
    Location:1063 → 1093
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:832 → 915
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:1010 → 1186
    Ank_2; Ankyrin repeats (3 copies)

  11. XM_037745396.1 → XP_037601324.1  protein TANC1 isoform X10

    UniProtKB/TrEMBL
    A0A2K5RWJ1
    Conserved Domains (5) summary
    COG0457
    Location:1124 → 1278
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:1154 → 1179
    TPR; TPR repeat [structural motif]
    sd00045
    Location:1007 → 1037
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:776 → 859
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:954 → 1130
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
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