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CCNT2 cyclin T2 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108309649, updated on 14-Mar-2024

Summary

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Gene symbol
CCNT2
Gene description
cyclin T2
See related
Ensembl:ENSCCAG00000024931
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107410.1 (5939504..5984565)

NW_016107410.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L26-like Neighboring gene serine/threonine-protein kinase 38-like Neighboring gene aminocarboxymuconate semialdehyde decarboxylase Neighboring gene uncharacterized LOC108309650 Neighboring gene U6 spliceosomal RNA Neighboring gene mitogen-activated protein kinase kinase kinase 19 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107410 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription, elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin/CDK positive transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-T2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107410.1 Reference Cebus_imitator-1.0

    Range
    5939504..5984565
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017536095.2 → XP_017391584.1  cyclin-T2 isoform X1

    UniProtKB/TrEMBL
    A0A2K5QED8
    Related
    ENSCCAP00000014239.1, ENSCCAT00000031677.1

  2. XM_017536096.2 → XP_017391585.1  cyclin-T2 isoform X2

    UniProtKB/TrEMBL
    A0A2K5QED0
    Related
    ENSCCAP00000014246.1, ENSCCAT00000031684.1

  3. XM_017536097.1 → XP_017391586.1  cyclin-T2 isoform X4

    Conserved Domains (1) summary
    cl40454
    Location:18 → 119
    CYCLIN_SF; Cyclin box fold superfamily

  4. XM_017536098.1 → XP_017391587.1  cyclin-T2 isoform X5

  5. XM_037741152.1 → XP_037597080.1  cyclin-T2 isoform X3

    Conserved Domains (1) summary
    cd20598
    Location:12 → 125
    CYCLIN_CCNT2_rpt2; second cyclin box found in cyclin-T2 (CCNT2)

  6. XM_037741153.1 → XP_037597081.1  cyclin-T2 isoform X4

    Conserved Domains (1) summary
    cl40454
    Location:18 → 119
    CYCLIN_SF; Cyclin box fold superfamily

RNA

  1. XR_001827439.2 RNA Sequence

  2. XR_005201486.1 RNA Sequence

    Related
    ENSCCAT00000031689.1
Nucleotide Protein
Heading Accession and Version

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