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FUBP1 far upstream element binding protein 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108305785, updated on 14-Mar-2024

Summary

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Gene symbol
FUBP1
Gene description
far upstream element binding protein 1
See related
Ensembl:ENSCCAG00000036537
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See FUBP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107318.1 (4267483..4305530)

NW_016107318.1Genomic Context describing neighboring genes Neighboring gene omega-amidase NIT2-like Neighboring gene DnaJ heat shock protein family (Hsp40) member B4 Neighboring gene nuclear nucleic acid-binding protein C1D-like Neighboring gene nexilin F-actin binding protein Neighboring gene mitoguardin 1 Neighboring gene peptidyl-prolyl cis-trans isomerase A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107318 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
far upstream element-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107318.1 Reference Cebus_imitator-1.0

    Range
    4267483..4305530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037739249.1 → XP_037595177.1  far upstream element-binding protein 1

    UniProtKB/TrEMBL
    A0A2K5SAE6
    Related
    ENSCCAP00000037352.1, ENSCCAT00000055143.1
    Conserved Domains (4) summary
    pfam09005
    Location:506 → 526
    DUF1897; Domain of unknown function (DUF1897)
    cd22478
    Location:97 → 171
    KH-I_FUBP1_rpt1; first type I K homology (KH) RNA-binding domain found in far upstream element-binding protein 1 (FUBP1) and similar proteins
    cd22481
    Location:185 → 254
    KH-I_FUBP1_rpt2; second type I K homology (KH) RNA-binding domain found in far upstream element-binding protein 1 (FUBP1) and similar proteins
    cl00098
    Location:299 → 351
    KH-I; K homology (KH) RNA-binding domain, type I
Nucleotide Protein
Heading Accession and Version

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