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PALS2 protein associated with LIN7 2, MAGUK p55 family member [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108303230, updated on 14-Mar-2024

Summary

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Gene symbol
PALS2
Gene description
protein associated with LIN7 2, MAGUK p55 family member
See related
Ensembl:ENSCCAG00000037294
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Also known as
MPP6
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107360.1 (8899734..9026596)

NW_016107360.1Genomic Context describing neighboring genes Neighboring gene neuropeptide Y Neighboring gene U4 spliceosomal RNA Neighboring gene gasdermin E Neighboring gene keratin, type II cytoskeletal 8-like Neighboring gene oxysterol binding protein like 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107360 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAGUK p55 subfamily member 6
Names
membrane palmitoylated protein 6
protein associated with LIN7 2, MAGUK family member

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107360.1 Reference Cebus_imitator-1.0

    Range
    8899734..9026596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017527001.2 → XP_017382490.1  MAGUK p55 subfamily member 6 isoform X2

    UniProtKB/TrEMBL
    A0A2K5SEZ3, A0A2K5SEZ6
    Related
    ENSCCAP00000038946.1, ENSCCAT00000056749.1
    Conserved Domains (5) summary
    smart00569
    Location:2 → 55
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12038
    Location:219 → 279
    SH3_MPP6; Src Homology 3 domain of Membrane Protein, Palmitoylated 6 (or MAGUK p55 subfamily member 6)
    cd00992
    Location:133 → 206
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00625
    Location:337 → 527
    Guanylate_kin; Guanylate kinase
    pfam02828
    Location:57 → 108
    L27; L27 domain

  2. XM_037737916.1 → XP_037593844.1  MAGUK p55 subfamily member 6 isoform X1

    UniProtKB/TrEMBL
    A0A2K5SEY9, A0A2K5SEZ6
    Conserved Domains (5) summary
    smart00569
    Location:2 → 55
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12038
    Location:233 → 293
    SH3_MPP6; Src Homology 3 domain of Membrane Protein, Palmitoylated 6 (or MAGUK p55 subfamily member 6)
    cd00992
    Location:133 → 206
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00625
    Location:351 → 541
    Guanylate_kin; Guanylate kinase
    pfam02828
    Location:57 → 108
    L27; L27 domain

  3. XM_017527000.2 → XP_017382489.1  MAGUK p55 subfamily member 6 isoform X1

    UniProtKB/TrEMBL
    A0A2K5SEY9, A0A2K5SEZ6
    Related
    ENSCCAP00000038949.1, ENSCCAT00000056752.1
    Conserved Domains (5) summary
    smart00569
    Location:2 → 55
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12038
    Location:233 → 293
    SH3_MPP6; Src Homology 3 domain of Membrane Protein, Palmitoylated 6 (or MAGUK p55 subfamily member 6)
    cd00992
    Location:133 → 206
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00625
    Location:351 → 541
    Guanylate_kin; Guanylate kinase
    pfam02828
    Location:57 → 108
    L27; L27 domain
Nucleotide Protein
Heading Accession and Version

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