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HACL1 2-hydroxyacyl-CoA lyase 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108299907, updated on 14-Mar-2024

Summary

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Gene symbol
HACL1
Gene description
2-hydroxyacyl-CoA lyase 1
See related
Ensembl:ENSCCAG00000026710
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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See HACL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107339.1 (138847..178000, complement)

NW_016107339.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like Neighboring gene collagen like tail subunit of asymmetric acetylcholinesterase Neighboring gene uncharacterized LOC108299910 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene biotinidase Neighboring gene ankyrin repeat domain 28

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107339 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid alpha-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-hydroxyacyl-CoA lyase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107339.1 Reference Cebus_imitator-1.0

    Range
    138847..178000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017522464.2 → XP_017377953.1  2-hydroxyacyl-CoA lyase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5QPS9, A0A2K5QPW0
    Related
    ENSCCAP00000017903.1, ENSCCAT00000035369.1

  2. XM_017522466.2 → XP_017377955.1  2-hydroxyacyl-CoA lyase 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5QQ30

  3. XM_017522463.2 → XP_017377952.1  2-hydroxyacyl-CoA lyase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5QPW0

  4. XM_037736217.1 → XP_037592145.1  2-hydroxyacyl-CoA lyase 1 isoform X6

    UniProtKB/TrEMBL
    A0A2K5QPW0
    Conserved Domains (1) summary
    PRK09259
    Location:1 → 507
    PRK09259; putative oxalyl-CoA decarboxylase; Validated

  5. XM_037736216.1 → XP_037592144.1  2-hydroxyacyl-CoA lyase 1 isoform X5

    UniProtKB/TrEMBL
    A0A2K5QPW0
    Conserved Domains (1) summary
    PRK09259
    Location:1 → 512
    PRK09259; putative oxalyl-CoA decarboxylase; Validated

  6. XM_037736219.1 → XP_037592147.1  2-hydroxyacyl-CoA lyase 1 isoform X9

    UniProtKB/TrEMBL
    A0A2K5QPW0
    Conserved Domains (1) summary
    PRK09259
    Location:5 → 469
    PRK09259; putative oxalyl-CoA decarboxylase; Validated

  7. XM_037736218.1 → XP_037592146.1  2-hydroxyacyl-CoA lyase 1 isoform X7

    UniProtKB/TrEMBL
    A0A2K5QPW0
    Conserved Domains (1) summary
    PRK09259
    Location:1 → 496
    PRK09259; putative oxalyl-CoA decarboxylase; Validated

  8. XM_037736215.1 → XP_037592143.1  2-hydroxyacyl-CoA lyase 1 isoform X4

    UniProtKB/TrEMBL
    A0A2K5QPW0
    Conserved Domains (1) summary
    PRK09259
    Location:10 → 523
    PRK09259; putative oxalyl-CoA decarboxylase; Validated

  9. XM_017522471.2 → XP_017377960.1  2-hydroxyacyl-CoA lyase 1 isoform X8

    UniProtKB/TrEMBL
    A0A2K5QPW0
Nucleotide Protein
Heading Accession and Version

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