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NXF1 nuclear RNA export factor 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108286198, updated on 14-Mar-2024

Summary

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Gene symbol
NXF1
Gene description
nuclear RNA export factor 1
See related
Ensembl:ENSCCAG00000030567
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107631.1 (299888..315212)

NW_016107631.1Genomic Context describing neighboring genes Neighboring gene testis-expressed protein 54-like Neighboring gene syntaxin 5 Neighboring gene transmembrane protein 223 Neighboring gene transmembrane protein 179B Neighboring gene TATA-box binding protein associated factor 6 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107631 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear RNA export factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107631.1 Reference Cebus_imitator-1.0

    Range
    299888..315212
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017503813.2 → XP_017359302.1  nuclear RNA export factor 1

    UniProtKB/TrEMBL
    A0A2K5RBW1
    Related
    ENSCCAP00000025617.1, ENSCCAT00000043141.1
    Conserved Domains (6) summary
    smart00804
    Location:556 → 618
    TAP_C; C-terminal domain of vertebrate Tap protein
    COG4886
    Location:200 → 371
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    cd00780
    Location:382 → 538
    NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
    sd00035
    Location:224 → 266
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam09162
    Location:116 → 197
    Tap-RNA_bind; Tap, RNA-binding
    pfam13855
    Location:265 → 327
    LRR_8; Leucine rich repeat
Nucleotide Protein
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