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PDE4D phosphodiesterase 4D [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108283072, updated on 14-Mar-2024

Summary

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Gene symbol
PDE4D
Gene description
phosphodiesterase 4D
See related
Ensembl:ENSCCAG00000021783
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107570.1 (170884..1721829, complement)

NW_016107570.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L5-like Neighboring gene uncharacterized LOC108283052 Neighboring gene eukaryotic translation initiation factor 2A-like Neighboring gene 5S ribosomal RNA Neighboring gene T-complex protein 1 subunit beta-like Neighboring gene uncharacterized LOC119467037 Neighboring gene 5S ribosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene protein SET-like Neighboring gene uncharacterized LOC108283075 Neighboring gene sequestosome-1-like Neighboring gene DEP domain containing 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016107570 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-AMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cAMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cAMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cardiac muscle cell contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-specific 3',5'-cyclic phosphodiesterase 4D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107570.1 Reference Cebus_imitator-1.0

    Range
    170884..1721829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017499191.2 → XP_017354680.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X2

    UniProtKB/TrEMBL
    A0A2K5PXM7
    Related
    ENSCCAP00000008361.1, ENSCCAT00000025739.1
    Conserved Domains (2) summary
    pfam00233
    Location:400 → 641
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:162 → 278
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  2. XM_037728085.1 → XP_037584013.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X1

    UniProtKB/TrEMBL
    A0A2K5PXI5
    Related
    ENSCCAP00000008365.1, ENSCCAT00000025742.1
    Conserved Domains (2) summary
    pfam00233
    Location:460 → 701
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:222 → 338
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  3. XM_017499194.2 → XP_017354683.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X3

    UniProtKB/TrEMBL
    A0A2K5PXK6
    Related
    ENSCCAP00000008374.1, ENSCCAT00000025752.1
    Conserved Domains (2) summary
    pfam00233
    Location:397 → 638
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:159 → 275
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  4. XM_037728086.1 → XP_037584014.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X6

    UniProtKB/TrEMBL
    A0A2K5PXL0, A0A2K5PXQ9
    Related
    ENSCCAP00000008379.1, ENSCCAT00000025757.1
    Conserved Domains (2) summary
    pfam00233
    Location:325 → 566
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:87 → 203
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  5. XM_017499195.2 → XP_017354684.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X4

    UniProtKB/TrEMBL
    A0A2K5PXL4
    Related
    ENSCCAP00000008384.1, ENSCCAT00000025762.1
    Conserved Domains (2) summary
    pfam00233
    Location:351 → 592
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:113 → 229
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  6. XM_017499196.2 → XP_017354685.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X7

    UniProtKB/TrEMBL
    A0A2K5PXR2
    Related
    ENSCCAP00000008387.1, ENSCCAT00000025765.1
    Conserved Domains (2) summary
    pfam00233
    Location:339 → 580
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:101 → 217
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  7. XM_017499198.2 → XP_017354687.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X5

    UniProtKB/TrEMBL
    A0A2K5PXR7
    Related
    ENSCCAP00000008392.1, ENSCCAT00000025770.1
    Conserved Domains (2) summary
    pfam00233
    Location:331 → 572
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:93 → 209
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  8. XM_017499202.2 → XP_017354691.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X10

    UniProtKB/TrEMBL
    A0A2K5PXE9, A0A2K5PXQ9
    Related
    ENSCCAP00000008319.1, ENSCCAT00000025696.1
    Conserved Domains (2) summary
    pfam00233
    Location:159 → 400
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:1 → 37
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  9. XM_017499201.2 → XP_017354690.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X9

    UniProtKB/TrEMBL
    A0A2K5PXF6, A0A2K5PXQ9
    Related
    ENSCCAP00000008330.1, ENSCCAT00000025707.1
    Conserved Domains (2) summary
    pfam00233
    Location:170 → 411
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:16 → 48
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  10. XM_017499200.2 → XP_017354689.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X8

    UniProtKB/TrEMBL
    A0A2K5PXQ9
    Related
    ENSCCAP00000008396.1, ENSCCAT00000025774.1
    Conserved Domains (2) summary
    pfam00233
    Location:205 → 446
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam18100
    Location:1 → 83
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)

  11. XM_037728087.1 → XP_037584015.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X11

    Conserved Domains (1) summary
    pfam18100
    Location:162 → 207
    PDE4_UCR; Phosphodiesterase 4 upstream conserved regions (UCR)
Nucleotide Protein
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