U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CACNB1 calcium voltage-gated channel auxiliary subunit beta 1 [ Cebus imitator (Panamanian white-faced capuchin) ]

Gene ID: 108281604, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CACNB1
Gene description
calcium voltage-gated channel auxiliary subunit beta 1
See related
Ensembl:ENSCCAG00000036635
Gene type
protein coding
RefSeq status
MODEL
Organism
Cebus imitator
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107543.1 (2141822..2160508, complement)

NW_016107543.1Genomic Context describing neighboring genes Neighboring gene plexin domain containing 1 Neighboring gene 60S ribosomal protein L26-like Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene ADP ribosylation factor like GTPase 5C Neighboring gene ribosomal protein L19 Neighboring gene SH3 and cysteine rich domain 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_016107543 Unplaced Scaffold Reference Cebus_imitator-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular junction development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
voltage-dependent L-type calcium channel subunit beta-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cebus_imitator-1.0

Genomic

  1. NW_016107543.1 Reference Cebus_imitator-1.0

    Range
    2141822..2160508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017497260.2 → XP_017352749.1  voltage-dependent L-type calcium channel subunit beta-1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5SBP9, A0A2K5SBR5
    Related
    ENSCCAP00000037773.1, ENSCCAT00000055565.1
    Conserved Domains (3) summary
    pfam00625
    Location:228 → 408
    Guanylate_kin; Guanylate kinase
    pfam12052
    Location:58 → 99
    VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
    cl17036
    Location:99 → 166
    SH3; Src Homology 3 domain superfamily

  2. XM_017497259.2 → XP_017352748.1  voltage-dependent L-type calcium channel subunit beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5SBR5
    Conserved Domains (3) summary
    pfam00625
    Location:273 → 453
    Guanylate_kin; Guanylate kinase
    pfam12052
    Location:58 → 99
    VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
    cl17036
    Location:99 → 166
    SH3; Src Homology 3 domain superfamily

  3. XM_017497261.2 → XP_017352750.1  voltage-dependent L-type calcium channel subunit beta-1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5SBR5
    Conserved Domains (3) summary
    pfam00625
    Location:226 → 406
    Guanylate_kin; Guanylate kinase
    pfam12052
    Location:11 → 52
    VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
    cl17036
    Location:52 → 119
    SH3; Src Homology 3 domain superfamily

  4. XM_017497262.2 → XP_017352751.1  voltage-dependent L-type calcium channel subunit beta-1 isoform X4

    UniProtKB/TrEMBL
    A0A2K5SBP4, A0A2K5SBR9
    Related
    ENSCCAP00000037793.1, ENSCCAT00000055585.1
    Conserved Domains (3) summary
    cd12041
    Location:99 → 166
    SH3_CACNB1; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta-1
    pfam00625
    Location:273 → 453
    Guanylate_kin; Guanylate kinase
    pfam12052
    Location:58 → 99
    VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.