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crebl2 cAMP responsive element binding protein-like 2 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108279917, updated on 14-Mar-2024

Summary

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Gene symbol
crebl2
Gene description
cAMP responsive element binding protein-like 2
See related
Ensembl:ENSIPUG00000005002
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 19
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 19 NC_030434.2 (8340483..8346496)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 19 NC_030434.1 (5779859..5784340)

Chromosome 19 - NC_030434.2Genomic Context describing neighboring genes Neighboring gene low density lipoprotein receptor-related protein 6 Neighboring gene dual specificity phosphatase 16 Neighboring gene G protein-coupled receptor 19 Neighboring gene TANK-binding kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article
  2. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-responsive element-binding protein-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030434.2 Reference Coco_2.0 Primary Assembly

    Range
    8340483..8346496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017494551.3 → XP_017350040.1  cAMP-responsive element-binding protein-like 2

    UniProtKB/TrEMBL
    A0A2D0T5Y5
    Related
    ENSIPUP00000007234.1
Nucleotide Protein
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Gene LinkOut

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