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odr4 odr-4 GPCR localization factor homolog [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108278340, updated on 14-Mar-2024

Summary

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Gene symbol
odr4
Gene description
odr-4 GPCR localization factor homolog
See related
Ensembl:ENSIPUG00000001230
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
c17h1orf27
Orthologs
human zebrafish all
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Genomic context

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See odr4 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 17 NC_030432.2 (17936782..17949056, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 17 NC_030432.1 (12875654..12888290, complement)

Chromosome 17 - NC_030432.2Genomic Context describing neighboring genes Neighboring gene prostaglandin G/H synthase 2 Neighboring gene phosducin a Neighboring gene translocated promoter region a, nuclear basket protein Neighboring gene proteoglycan 4a Neighboring gene retinoid x receptor, gamma a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein odr-4 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030432.2 Reference Coco_2.0 Primary Assembly

    Range
    17936782..17949056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017491649.3 → XP_017347138.1  protein odr-4 homolog isoform X4

    UniProtKB/TrEMBL
    A0A2D0SWS7

  2. XM_017491648.3 → XP_017347137.1  protein odr-4 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2D0SWS9

  3. XM_017491650.3 → XP_017347139.1  protein odr-4 homolog isoform X5

    UniProtKB/TrEMBL
    A0A2D0SWS8

  4. XM_017491647.3 → XP_017347136.1  protein odr-4 homolog isoform X3

    UniProtKB/TrEMBL
    A0A2D0SX86
    Related
    ENSIPUP00000001715.1

  5. XM_017491646.3 → XP_017347135.1  protein odr-4 homolog isoform X1

    UniProtKB/TrEMBL
    A0A2D0SXT3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases