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gucy1a2 guanylate cyclase 1, soluble, alpha 2 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108278235, updated on 14-Mar-2024

Summary

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Gene symbol
gucy1a2
Gene description
guanylate cyclase 1, soluble, alpha 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 17 NC_030432.2 (3135905..3166475)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 17 NC_030432.1 (13811177..13836485, complement)

Chromosome 17 - NC_030432.2Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene CWF19 like cell cycle control factor 2 Neighboring gene aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase Neighboring gene glutamate receptor, ionotropic, AMPA 4a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanylate cyclase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxygen levels IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of guanylate cyclase complex, soluble IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanylate cyclase soluble subunit alpha-2
Names
guanylate cyclase 1 soluble subunit alpha 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030432.2 Reference Coco_2.0 Primary Assembly

    Range
    3135905..3166475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053687301.1 → XP_053543276.1  guanylate cyclase soluble subunit alpha-2 isoform X1

    UniProtKB/TrEMBL
    A0A9F7RJ60

  2. XM_053687302.1 → XP_053543277.1  guanylate cyclase soluble subunit alpha-2 isoform X2

    UniProtKB/TrEMBL
    A0A9F7RMR0
Nucleotide Protein
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Gene LinkOut

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