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gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108277990, updated on 14-Mar-2024

Summary

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Gene symbol
gdpd1
Gene description
glycerophosphodiester phosphodiesterase domain containing 1
See related
Ensembl:ENSIPUG00000016248
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 17 NC_030432.2 (5814265..5825960)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 17 NC_030432.1 (21550612..21563202, complement)

Chromosome 17 - NC_030432.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 120Ab Neighboring gene uncharacterized LOC124629070 Neighboring gene yippee-like 2b Neighboring gene huntingtin interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoric diester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acylethanolamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophospholipase D GDPD1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030432.2 Reference Coco_2.0 Primary Assembly

    Range
    5814265..5825960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017491083.3 → XP_017346572.1  lysophospholipase D GDPD1

    UniProtKB/TrEMBL
    A0A2D0SV56
    Related
    ENSIPUP00000024062.1
Nucleotide Protein
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Gene LinkOut

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