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uvssa UV-stimulated scaffold protein A [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108268675, updated on 14-Mar-2024

Summary

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Gene symbol
uvssa
Gene description
UV-stimulated scaffold protein A
See related
Ensembl:ENSIPUG00000016843
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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See uvssa in Genome Data Viewer
Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 8 NC_030423.2 (4490297..4517111, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 8 NC_030423.1 (4281784..4308762, complement)

Chromosome 8 - NC_030423.2Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 142 Neighboring gene NK1 transcription factor related 2-like,b Neighboring gene trypsin inhibitor ClTI-1 Neighboring gene trypsin inhibitor ClTI-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to UV IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription-coupled nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UV-stimulated scaffold protein A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030423.2 Reference Coco_2.0 Primary Assembly

    Range
    4490297..4517111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017473757.2 → XP_017329246.1  UV-stimulated scaffold protein A

    UniProtKB/TrEMBL
    A0A2D0RH69

  2. XM_017473755.2 → XP_017329244.1  UV-stimulated scaffold protein A

    UniProtKB/TrEMBL
    A0A2D0RH69
    Related
    ENSIPUP00000024915.1
Nucleotide Protein
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Gene LinkOut

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