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cfap57 cilia and flagella associated protein 57 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108268281, updated on 3-Apr-2024

Summary

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Gene symbol
cfap57
Gene description
cilia and flagella associated protein 57
See related
Ensembl:ENSIPUG00000013680
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
WDR65
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 7
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 7 NC_030422.2 (12013824..12028743)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 7 NC_030422.1 (10232996..10247675)

Chromosome 7 - NC_030422.2Genomic Context describing neighboring genes Neighboring gene doublesex- and mab-3-related transcription factor 3 Neighboring gene EBNA1 binding protein 2 Neighboring gene transmembrane protein 125 Neighboring gene cilia- and flagella-associated protein 57

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cilia- and flagella-associated protein 57
Names
WD repeat-containing protein 65

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030422.2 Reference Coco_2.0 Primary Assembly

    Range
    12013824..12028743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047156718.2 → XP_047012674.1  cilia- and flagella-associated protein 57

    UniProtKB/TrEMBL
    A0A979EXR8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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