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colq collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108267399, updated on 14-Mar-2024

Summary

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Gene symbol
colq
Gene description
collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
See related
Ensembl:ENSIPUG00000002698
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 1 NC_030416.2 (14207552..14221059)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 1 NC_030416.1 (13325904..13339385)

Chromosome 1 - NC_030416.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C2orf66 Neighboring gene 2-hydroxyacyl-CoA lyase 1 Neighboring gene pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 Neighboring gene FKBP prolyl isomerase 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholinesterase collagenic tail peptide
Names
collagen like tail subunit of asymmetric acetylcholinesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030416.2 Reference Coco_2.0 Primary Assembly

    Range
    14207552..14221059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017471442.3 → XP_017326931.2  acetylcholinesterase collagenic tail peptide

    UniProtKB/TrEMBL
    A0A2D0RA13
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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