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trim36 tripartite motif containing 36 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108265835, updated on 14-Mar-2024

Summary

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Gene symbol
trim36
Gene description
tripartite motif containing 36
See related
Ensembl:ENSIPUG00000000211
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 5 NC_030420.2 (19552853..19578122)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 5 NC_030420.1 (18113852..18142008)

Chromosome 5 - NC_030420.2Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 112 Neighboring gene protein geranylgeranyltransferase type I, beta subunit Neighboring gene coiled-coil serine-rich protein 1 Neighboring gene glutamate receptor, ionotropic, delta 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TRIM36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030420.2 Reference Coco_2.0 Primary Assembly

    Range
    19552853..19578122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053680294.1 → XP_053536269.1  E3 ubiquitin-protein ligase TRIM36 isoform X1

    UniProtKB/TrEMBL
    A0A9F7TKH0

  2. XM_053680295.1 → XP_053536270.1  E3 ubiquitin-protein ligase TRIM36 isoform X2

    UniProtKB/TrEMBL
    A0A9F7R019
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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